Structure–Activity Relationship (SAR) in Medicinal Chemistry: Definition, Importance, and Applications

Structure–Activity Relationship (SAR) in Medicinal Chemistry: Definition, Importance, and Applications

The Structure Activity Relationship is the relationship between the chemical or 3D structure of a molecule and its biological activity. The analysis of SAR enables the determination of the chemical groups responsible for evoking a target biological effect in the organism. This allows modification of the effect or the potency of a bioactive compound by changing its chemical structure. 

A Structure-Activity Relationship is the relationship of the molecular structure of a chemical with a physicochemical property, environmental fate attribute, and/or specific effect on human health or an environmental species.

Part 1

Sympathomimetic agents

Structure Activity Relationship

directly bind to the adrenergic receptors in the postsynaptic membrane.

Structure Activity Relationship of catecholamines:

  • Catechol ring is important.
  • β-hydroxyl group is important.
  • Stereochemistry at β position should be R.
  • Bulkiness of groups attached to the amino has a significant effect on selectivity (alpha or Beta receptor activity).
  • alpha substitution increases stability and selectivity but reduces activity.

Examples of sympathomimetics

Isoprenaline - Wikipedia

Isoproterenol (Isoprenaline):

Acts mainly on β1 and β2More stable to MAO metabolism.

File:Colterol.svg - Wikipedia

Colterol:

10 X more potent on β2 than on cardiac β1

Orciprenaline - Wikipedia

Metaprotenol:

Selective β2 agonist. Long-acting bronchodilator

File:Salbutamol structure.svg - Wikipedia

Salbutamol

Selective β2 agonist. Long-acting bronchodilator.

File:Ephedrine.png - Wikipedia

Ephedrine:

Used as bronchodilator and cardiac stimulant. Orally available

Pseudoephedrine - Wikipedia

Pseudoephedrine:

Used as nasal decongestant.

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